Prof.Dr. MEHMET VOLKAN ATALAY
FACULTY OF ENGINEERING
PublicationsResearchMembership & Awards
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Education

  Bachelor's, Middle East Technical University, Electric-electronic. Eng.
  Master's, Middle East Technical University, Electric-electronic. Eng.
  Doctorate, Universite Rene Descartes-Paris V, Computer Science

Research

Thesis Supervised

  A.1 Texture Extraction and Reconstruction from Multiple Images. Msc Thesis. Serkan Genc. (1999)
  A.2 Segmentation of Human Face. Msc Thesis. Selin Baskan. (2000)
  A.3 Comparison of Photoconsistency Measures Used in the Voxel Coloring Algorithm. Msc Thesis. Oğuz Özün. (2002)
  A.4 3D Reconstruction of Rigid Objects from Multiple Calibrated Views. Phd Thesis. Adem Y. Mülayim. (2002)
  A.5 Embedding Linguistic Postprocessing for Turkish Character Recognition. Phd Thesis. Sait U. Korkmaz. (2002)
  A.6 Cognitive and Computational Aspects of Gender Estimation from Faces. Msc Thesis. Koray Balcı. (2002)
  A.7 Appearance Reconstruction of Three Dimensional Models from Real Images. Msc Thesis. Ulaş Yılmaz. (2002)
  A.8 Relative Verification of Projective Reconstructions from an Image Pair. Msc Thesis. Burçak Otlu. (2002)
  A.9 Character Recognition for Turkish Language. Msc Thesis. Kırçiçeği Y.G. Akıncı. (2002)
  A.10 Prediction of protein subcellular localization using global protein sequence feature. Msc Thesis. B.Bozkurt. (2003)
  A.11 Fast object tracking by fusing adaptive background models and mean-shift analysis. Msc Thesis. O.Tuzel. (2003)
  A.12 Image based extraction of material reflectance properties of 3D object. Msc Thesis. M.E. Erdem. (2003)
  A.13 Silhouette based 3D reconstruction by energy minimization. Msc Thesis. E. Mengi. (2003)
  A.14 Vision based humain computer interaction using laser pointer. Msc Thesis. I.A.Erdem. (2003)
  A.15 Towards finding Optimal Mixture of subspaces for Data Classification. Phd Thesis. M.Mohamed. (2003)
  A.16 Reconstruction of a 3D head model from images. Phd Thesis. R.Hassanpour. (2003)
  A.17 Texture discrimination and segmentation of remotely sensed imagery by using adaptive subband decomposition. Msc Thesis. M. Yaman. (2003)
  A.18 Prediction of protein subcellular localization based on primary sequence data. Msc Thesis. M.Ozarar. (2003)
  A.19 Shortest path analysis in dynamic transportation networks by expert systems. Msc Thesis. G. Eke. (2003)
  A.20 Texture Classification and Retrieval using Random Neural Network Model . Msc Thesis. A.Teke. (2003)
  A.21 Interactive classification of satellite image content based on query by example. Msc Thesis. Oral Dalay. (2006)
  A.22 A classification system for the problem of protein subcellular localization. Msc Thesis. G.Alay. (2007)
  A.23 A Clustering method for the problem of protein subcellular localization prediction. Msc Thesis. P.Bezek. (2007)
  A.24 Improving interactive classification of satellite image content. Msc Thesis. G.Tekkaya. (2007)
  A.25 SUBSEQUENCE FEATURE MAPS FOR PROTEIN FUNCTION ANNOTATION. Phd Thesis. ÖMER SİNAN SARAÇ. (2008)
  A.26 AUTOMATED BIOLOGICAL ACQUISITION AND INTEGRATION USING MACHINE LEARNING TECHNIQUES . Phd Thesis. LEVENT ÇARKACIOĞLU. (2009)
  A.27 PREDICTION OF ENZYME CLASSES IN A HIERARCHICAL APPROACH BY USING SPMAP. Msc Thesis. AYŞE GÜL YAMAN. (2009)
  A.28 HIERARCHICAL RECONSTRUCTION OF 3 DIMENSIONAL OBJECTS. Phd Thesis. SERKAN GENÇ. (2010)
  A.29 AUTOMATIC RECONSTRUCTION OF PHOTOREALISTIC 3-D BUILDING MODELS FROM SATELLITE AND GROUND-LEVEL IMAGES. Phd Thesis. EMRE SÜMER. (2011)
  A.30 NETWORK STRUCTURE BASED PATHWAY ENRICHMENT SYSTEM TO ANALYZE PATHWAY ACTIVITIES. Phd Thesis. ZERRİN IŞIK. (2011)
  A.31 PREDICTION OF PROTEIN SECONDARY STRUCTURE BY COMPUTATIONAL METHODS. Phd Thesis. GÜLBERAL KIRÇİÇEĞİ YOKSUL KORKMAZ. (2012)
  A.32 AN EXTENSION TO GOPRED METHOD TO ANNOTATE SWISS-PROT AND TREMBL SEQUENCES FOR ALL GENE ONTOLOGY CATEGORIES AND EC NUMBERS. Msc Thesis. AHMET SÜREYYA RİFAİOĞLU. (2015)
  A.33 NETWORK STRUCTURE BASED PATHWAY ANALYSIS TOOL FOR LARGE SCALE DATA. Msc Thesis. HASAN FEHMİ DANACI. (2015)
  A.34 PREDICTION OF ENZYMATIC PROPERTIES OF PROTEIN SEQUENCES BASED ON THE ENZYME COMMISION NOMENCLATURE. Msc Thesis. ALPEREN DALKIRAN. (2017)

Project Work

  A.1 Nesne Görüntülerinden 3 Boyutlu Otomatik Model Geriçatımı ve Bir Nesne Etrafından Kontrollü Görüntü Alımı. Research Fund, 1 JUNE 2000 - 1 MAY 2001. Coordinator .
  A.2 Uzaktan Algılama Görüntülerinin Doku Modellerine Dayalı Gözetimsiz Bölütlenmesi. DPT, 1 JANUARY 2000 - 1 APRIL 2001. Coordinator .
  A.3 Görüntü Veritabanlarında Renk Özelliklerine Dayalı Sorgulama ve Erişim. Research Fund, 1 MAY 2000 - 1 APRIL 2001. Coordinator .
  A.4 Görüntü Tabanlı Otomatik 3-Boyutlu Sanal Nesne Modelleyicisi. TÜBİTAK, 1 JANUARY 2000 - 1 JANUARY 2002. Coordinator .
  A.5 Image Retrieval. French Ministry of Foreign Affairs, 1 MARCH 2001 - 1 SEPTEMBER 2001. Coordinator .
  A.6 Content Based Image Retrieval. Foreign Ministry of France, 1 JANUARY 2002 - 1 DECEMBER 2002. Coordinator .
  A.7 Görüntü Tabanlı Otomatik 3-Boyutlu Sanal Nesne Modelleyicisi. TÜBİTAK, 1 JANUARY 2002 - 1 JULY 2002. Coordinator .
  A.8 Intelligent Detection of Geographical Objects from Satelite Images. TUBITAK, 1 APRIL 2004 - 1 APRIL 2006. Coordinator .
  A.9 Altdizi analizine dayali genom anlamlandirmasi. TUBITAK, 1 OCTOBER 2005 - 1 SEPTEMBER 2007. Coordinator .
  A.10 Altdizi Analizine Dayalı Genom Anlamlandırması. TUBITAK, 1 OCTOBER 2005 - 1 SEPTEMBER 2007. Coordinator .
  A.11 Genome annotation based on subsequence analysis. TUBİTAK Projects , 1 OCTOBER 2005 - 1 SEPTEMBER 2007. Local Coordinator .
  A.12 Member of the Board of Directors of Izmir Biomedicine and Genome Center. OTHER Ministry of Development Research Infrastructures, 1 SEPTEMBER 2017 - 1 DECEMBER 2017. Local Coordinator .
  A.13 Member of the International Research and Development Advisory Board of Arcelik. AGUDOS Project, Consultancy, Test and Experiments. Consultancy, Test and Experiments , 1 JANUARY 2017 - 1 DECEMBER 2017. Local Coordinator .
  A.14 Member of Technology Advisory Board of Turkish Aerospace Industries (TAI). AGUDOS Project, Consultancy, Test and Experiments. Consultancy, Test and Experiments , 1 JANUARY 2017 - 1 DECEMBER. Local Coordinator .
  A.15 Comprehensive Resource of Biomedical Relations with Deep Learning and Network Representations (CROssBAR) (Derin Öğrenme Teknikleri Ve Ağ Analizi Yöntemleriyle Hazırlanmış Kapsamlı Biyomedikal İlişkiler Kaynağı) . Projects funded within the scope other international institutions Other Newton-Katip Celebi Fund Institutional Links Program Grant, 1 NOVEMBER 2017 - 1 NOVEMBER 2019. Local Coordinator .
  A.16 Protein İşlevlerinin Altdizi Analizi ile Büyük Ölçekte Öngörme Yöntemleri. BAP-1 BAP-1 , 1 JANUARY 2017 - 1 DECEMBER 2017. Local Coordinator .
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